Insertion junction: CLIP2.021491_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021491
Chromosome:chromosome 5
Location:2932309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755247 (1 of 1) IPR003010//IPR020683 - Carbon-nitrogen hydrolase // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACACGTGCGAAGACAGCAGCAACCGTAGCAGCAGCAGTAGCTAGGGC
Internal bar code:CTGGCCTATTTGGGTCAAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGCATACCTGTTGACA
Suggested primer 2:AAGTCTTCCGTCCAGCACTG