Insertion junction: CLIP2.021502_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021502
Chromosome:chromosome 3
Location:6269865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCTGTCAAGTCTCTGGACGAGTGTGAGATGCTGGTGCACGTGCTGC
Internal bar code:TTATCCTTACGGATGACATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTCATGAGCGCAATTG
Suggested primer 2:CGCATACGCAGTCACACAAG