Insertion junction: CLIP2.021503_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021503
Chromosome:chromosome 9
Location:1499875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGGGTGTGTTTGTGGTTTGCTTATGTGCAAGGCGGCAGTCAGTGTG
Internal bar code:GCGCTTGGGATAAGTTTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACATTGCAAGGACGCG
Suggested primer 2:CAGCTTTCATCGCGTCATGG