Insertion junction: CLIP2.021512_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021512
Chromosome:chromosome 10
Location:1176320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425800 ORN1 (1 of 1) 3.1.13.3 - Oligonucleotidase; Putative organellar oligoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGGAACCCGGGAACTCGGTGCATTTCGGGAATGGGGACCATTGTCGC
Internal bar code:GCGCCAATTATGGATCTGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2056
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGGATTCTCTAGCTTGC
Suggested primer 2:CTACATCCAGACGTCTCCGC