Insertion junction: CLIP2.021517_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021517
Chromosome:chromosome 3
Location:4508908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175851 (1 of 13) IPR001487 - Bromodomain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAACCGCACCTTTCCGCGCATGCGCTGCTGCAGGCGATGGAGCACAA
Internal bar code:GACTAATAGTGGTGTACCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2941
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGCCACCACCATGTTC
Suggested primer 2:TTTTCTCCCGCATCGAAGCT