Insertion junction: CLIP2.021526_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021526
Chromosome:chromosome 2
Location:4228216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104350 PDI5 (1 of 1) PTHR10984//PTHR10984:SF37 - ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN // CELL REDOX HOMEOSTASIS PROTEIN-RELATED; Protein disulfide isomerase 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTGCACGAGACCAGCAAACCCTGGTGCGTTTCCCGCCAGCCGTGAG
Internal bar code:AACTCTTCCGTTGTGAGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAACCCACAACGCATGCT
Suggested primer 2:AGGGCAGTGTTGGGTTGAAA