Insertion junction: CLIP2.021531_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021531
Chromosome:chromosome 1
Location:6635126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047265 PHC52 (1 of 1) IPR000772//IPR003882//IPR024616 - Ricin B, lectin domain // Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 52 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACCCCACCCCACAAACCAACCACCTGCCATGCATGCACCCGCCTTC
Internal bar code:GGGTACTTTAGTGAGTTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATGCCCATCTGGAACTG
Suggested primer 2:CCCTCGTGAACCCCTACCTA