Insertion junction: CLIP2.021539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021539
Chromosome:chromosome 9
Location:3156910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394362 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAGGTGGGCTGCTAGGCTGCACGGATCCCAGCTTGGAGCCTGCCATT
Internal bar code:GGCCCACTATTGTTGCTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:8192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCAGCTGCATATCGTG
Suggested primer 2:GTGCACCCAGTCTCTGAGAC