Insertion junction: CLIP2.021540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021540
Chromosome:chromosome 16
Location:421064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693450 ISG-C1 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTGCGTCACCGTCGCCAGTCGACAACCAGCAGGTGCAACGTCTTCAC
Internal bar code:ATATAAACACTTAGAGTTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GACGATCAGGGCAGATCAGG
Suggested primer 2:TGGAGCATGGAGATGAGGGA