Insertion junction: CLIP2.021550_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021550
Chromosome:chromosome 6
Location:3356509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800655 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGGCGTGGTGTGCGGCGGCGGTCACCTTCGCCATCAGCTCCTCCAT
Internal bar code:GAGTATATACGCGGGTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGAACGAGTCCAAGACC
Suggested primer 2:GAACTCGGGGAACTTGAGGG