Insertion junction: CLIP2.021553_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021553
Chromosome:chromosome 14
Location:2490045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCCCGCCAACCGTCACAGCACCGCAACACCCGCGCACCGACAACCCG
Internal bar code:ACGCGACTTTTTCTAGTTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2747
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGAAGATGGACTGGCG
Suggested primer 2:CCACTGTTGCAGTTCCTTGC