Insertion junction: CLIP2.021553_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021553
Chromosome:chromosome 14
Location:2490045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTGCTCGCTGGCGCCAGCTCAGCTGTGATGCTTGGCGCCTGCCTGG
Internal bar code:GAAAGTAAAGACGTGATTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1793
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGTTGCAGTTCCTTGC
Suggested primer 2:AGGTTGAAGATGGACTGGCG