Insertion junction: CLIP2.021554_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021554
Chromosome:chromosome 3
Location:5616741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGGCAGCGGGTGGCGGAGGCGGCGGCACACGCGGCGCGAGAGGCAG
Internal bar code:AGCCTGGTTACCTCGAGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGTATGTGCCAATGCTG
Suggested primer 2:GTCAGGCTGTGTGGGATTGA