Insertion junction: CLIP2.021556_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021556
Chromosome:chromosome 17
Location:2673401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717050 (1 of 16) IPR003439//IPR003593//IPR013525//IPR027417 - ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAAGTATGACTACCTGGGTCACGACAGTCACGCGACGCTCGGTAACA
Internal bar code:TGAACTAAGTGAGTCACATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:149
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATCCCCCTTCCTCCTCC
Suggested primer 2:GATCCAGCCTATCCACACCG