Insertion junction: CLIP2.021556_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021556
Chromosome:chromosome 17
Location:2673404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717050 (1 of 16) IPR003439//IPR003593//IPR013525//IPR027417 - ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGATAAGCCTGGAACCCCACGGGCGACCATTCGGCCTGACCCCGCG
Internal bar code:ACCATGGGGGGAGAGCCCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCAGCCTATCCACACCG
Suggested primer 2:AGAATCCCCCTTCCTCCTCC