Insertion junction: CLIP2.021561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021561
Chromosome:chromosome 17
Location:2063519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711200 PGM16 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; (1 of 1) PTHR18901//PTHR18901:SF2 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // GLYCEROL-1-PHOSPHATE PHOSPHOHYDROLASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTCCGGTCCATTCAGCGATGACGCCATGAAGCCATGGAGGTCGGGT
Internal bar code:GTTTAGACTTGGAAAAAAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGATTCATTAGCCCGCTC
Suggested primer 2:GTGAGTTCCTGGACTGGGTG