Insertion junction: CLIP2.021590_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021590
Chromosome:chromosome 7
Location:5897458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353950 XPG5 DNA repair 5'-3' exonuclease; (1 of 1) 3.1.11.1 - Exodeoxyribonuclease I / Exonuclease I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCTTTTACATGCCACAACTCCATCCGCAGCCTACCAGACCGAACCG
Internal bar code:CTGGTTGAAAATCGGCGCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1620
LEAP-Seq percent confirming:8.88889
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGTGTTTGCTCTGTG
Suggested primer 2:GTATGGGTACTTAGCGGGCC