Insertion junction: CLIP2.021593_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021593
Chromosome:chromosome 3
Location:7934812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCGTCTGACAGGATGGTGAAGCGGTCCAGGCGGCCCTCCTCTCCGG
Internal bar code:TGTTTGTGCTTCCAGTGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4746
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACATGCCGTACTGGAT
Suggested primer 2:GATGCTGGTAGTCTACGCCC