Insertion junction: CLIP2.021600_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021600
Chromosome:chromosome 3
Location:646472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145647 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGCTGGCTTCGCCAAGGCCGATGAGGCCGCCGCCTCCGCGACCAC
Internal bar code:TGTTTCACGGGGAGGTTGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4030
LEAP-Seq percent confirming:84.8485
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCAGTGGCGGCAGT
Suggested primer 2:TTCGCCAAGGCCGATGAG