Insertion junction: CLIP2.021603_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021603
Chromosome:chromosome 9
Location:6286286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413950 EFH6 EF-hand Calcium binding protein; (1 of 5) PTHR23050:SF90 - CENTRIN-3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGAGCAAGAGGTGAGTGGCGTTGTTGTGTGGCCGCGCCAGTTAGCCC
Internal bar code:AGTGTCTTCCCCAATTACAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1208
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATCTGGAAGCTCCACC
Suggested primer 2:AAAGGGTTGATGGGAGCGAG