Insertion junction: CLIP2.021605_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021605
Chromosome:chromosome 1
Location:1319151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006900 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATTAAATGTTGGGGTCTGGGAACACGCTGCACGCTACGGGACTACG
Internal bar code:TTCATACCCTAGGATAAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TATAACGGCGAACTCGGTCG
Suggested primer 2:ATGTAGAAGCCCCCAAACCG