Insertion junction: CLIP2.021605_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021605
Chromosome:chromosome 1
Location:1319155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006900 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACGTAGTATGGGGTCTGTGCGCGTGTGACCGTACGTGTGCGTGGTG
Internal bar code:TTCATACCCTAGGATAAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:956
LEAP-Seq percent confirming:3.80952
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:101
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGAAGCCCCCAAACCG
Suggested primer 2:TATAACGGCGAACTCGGTCG