Insertion junction: CLIP2.021608_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021608
Chromosome:chromosome 8
Location:1228833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363350 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTTGAGCCAAAGCTGGGGATGGGGTGTCACACGCACGCGCCTTCCCC
Internal bar code:TGGTGAGATGTTAGATGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTTACCTTGCAGGACAT
Suggested primer 2:ACGAGAAGAAGCAGGTGTGG