Insertion junction: CLIP2.021610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021610
Chromosome:chromosome 17
Location:181835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697150 (1 of 1) IPR000104//IPR003594//IPR024975 - Antifreeze protein, type I // Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCACATCGGCGCCCGCGCCCGCTCCTCCCGCCGCTGCCACCGCCTCC
Internal bar code:AAGATAAGCGTTACCCTGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACCGCCACTGCTACTG
Suggested primer 2:GGTGTGGAAAGCAGCACAAG