Insertion junction: CLIP2.021614_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021614
Chromosome:chromosome 13
Location:3418649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586916 SCL27,SRS6,SRS9 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12900 - FUS-interacting serine-arginine-rich protein 1 (FUSIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGCACAAGCACATGTCCCCAAGCACGCGCGGTCCGAGCATGTGGCA
Internal bar code:TGTCAGGCCTGTACACTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2895
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTGTACATGGCGTCCT
Suggested primer 2:CTGGGTTATGGCGCAAATCG