Insertion junction: CLIP2.021618_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021618
Chromosome:chromosome 3
Location:4770876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177750 MAE10 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; related to EDS5, enhanced disease susceptibility gene intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTCTCCTTCCGCAACTGGATCCCGATCCAACTCCTTCCCTCCCCCG
Internal bar code:CCTAGTTCGATTCGCTGTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGCAAAGCTCAACACA
Suggested primer 2:GTTTGGACACCCATGCACAC