Insertion junction: CLIP2.021628_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021628
Chromosome:chromosome 3
Location:7283873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207250 GLN4 (1 of 2) PTHR20852:SF50 - GLUTAMINE SYNTHETASE CYTOSOLIC ISOZYME 1-1-RELATED; Glutamine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATTAGCCGACCGCCCAGGACGCGCGCACCTGGGCCGTCACCTCCGGC
Internal bar code:CTAATGCGGCCTCTGGAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2257
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTGTAGAAAGCCGAA
Suggested primer 2:CCGTGTTCAGGGTCATGTGA