Insertion junction: CLIP2.021631_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021631
Chromosome:chromosome 7
Location:2858417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332250 (1 of 9) PF00010 - Helix-loop-helix DNA-binding domain (HLH); Basic helix-loop-helix transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCGGGGAGGGTGAGTCCGAGCGGCACCAGCGTGTAACCCTGCGACGG
Internal bar code:TCTGTGCCTTACAGGAGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3292
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGACGTCAGCCAGGATG
Suggested primer 2:CTGACAGATGGCGACGCTAT