Insertion junction: CLIP2.021635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021635
Chromosome:chromosome 15
Location:1223388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801721 NCL61 Nuclear Control of chloroplast-Like 61; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCGCTCAGGAGGCCTACCTGCTGCAGCAGCTGCAGGATCTGCTAT
Internal bar code:AAAATTGGAACAGGGTTCAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:12.9032
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCACCTGCTTCTCAGAG
Suggested primer 2:CTTGTTGCACAGGCCCTTTG