Insertion junction: CLIP2.021647_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021647
Chromosome:chromosome 3
Location:8154457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200650 CHI2 (1 of 1) K17525 - chitinase domain-containing protein 1 (CHID1); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTGGCCACGCAAACGAGCTCTTTGACCGTCCCTGCAGCCCGCCCTGC
Internal bar code:GGGCTAGTGGCGTTTGACGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGAAGCTGTACCTGGC
Suggested primer 2:AAGTAACCCGCACGTGCTAA