Insertion junction: CLIP2.021652_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021652
Chromosome:chromosome 16
Location:2701831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661800 (1 of 1) PF04949 - Transcriptional activator (Transcrip_act) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGTGAGGGCAGGTGCCGTGGCGATAGGGAGGATCATCATGTCCAAG
Internal bar code:TTTGTGGGGTAAACCTTCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3289
LEAP-Seq percent confirming:94.2029
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACACACTGCTG
Suggested primer 2:GTGTGTTGGAGAGAGGGACG