Insertion junction: CLIP2.021652_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021652
Chromosome:chromosome 16
Location:2701832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661800 (1 of 1) PF04949 - Transcriptional activator (Transcrip_act) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCGAACCCAAGGTCACGCGCCTCGCTCTTGGGAGCTGCCAAAGCACC
Internal bar code:GCTCAGGGTTCAGGAACTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTGGAGAGAGGGACG
Suggested primer 2:CACACACACACACACTGCTG