Insertion junction: CLIP2.021661_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021661
Chromosome:chromosome 3
Location:551349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145227 (1 of 1) K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTGGAGCCGGAGGCGGGCGGCAGGTCGTCCAGCCCGCCACCGCCACC
Internal bar code:GGGCTATATTATACTATACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTCCAGCTGCTTGACT
Suggested primer 2:CCCCACTGGAATGGTCACTC