Insertion junction: CLIP2.021663_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021663
Chromosome:chromosome 2
Location:4508485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106700 OPR4,RAP1 OctotricoPeptide Repeat protein 4; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCCTGTATGCTCGAAATAAGTTGGCGGGCGCAGGGCTCCGCAGCGTC
Internal bar code:TCGGCGGCGGACGGGGGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCAGGAACACACAACCA
Suggested primer 2:ATGAAGCAGTCCACGGGATG