Insertion junction: CLIP2.021664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021664
Chromosome:chromosome 2
Location:6997663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389541 OPR9 OctotricoPeptide Repeat protein 9; (1 of 1) IPR000104//IPR011237//IPR011335//IPR013584 - Antifreeze protein, type I // Peptidase M16 domain // Restriction endonuclease type II-like // RAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGACCAGCGCAGCGGCAGGCCGGTGCGTGTGGGTGCAGCCGCGGGTG
Internal bar code:AGTCGGACCGAGGTCGCCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3614
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAAGGACATGACCACCA
Suggested primer 2:GATTTGGGTCTGCAGACGGA