Insertion junction: CLIP2.021673_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021673
Chromosome:chromosome 5
Location:270992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800511 (1 of 1) K01673 - carbonic anhydrase (cynT, can) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGAAACTGCTCTGGGCTTGTCGTGTACCACCAGCTGCTGCCCACC
Internal bar code:GATCATTGCGTGACCTAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTAAGGTGGTGGGCACA
Suggested primer 2:CCGAAAGCATCTTCCGCATG