Insertion junction: CLIP2.021679_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021679
Chromosome:chromosome 5
Location:2174570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237283 (1 of 7) IPR020850 - GTPase effector domain, GED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCGTTCCCCTGAAACCTTTCCCCACACCCCCTCCCCTTCAGCCCC
Internal bar code:TCCGTAGGTTCCGCCGCCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGCATCGATGAGCTTTG
Suggested primer 2:AGGGCAAGCTTAATGGGCAT