Insertion junction: CLIP2.021708_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021708
Chromosome:chromosome 12
Location:4571561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521600 EEP7 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Endonuclease/exonuclease/phosphatase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCCTGTTCAGGTTCCCTTGCATCATGCTGCGTTACCTCCCTCCGTG
Internal bar code:TAGGATCAGGCACTGTGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:32.1429
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCATATTTGCGACGCTG
Suggested primer 2:CCTTCTCGCGCATGTTCATG