Insertion junction: CLIP2.021715_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021715
Chromosome:chromosome 7
Location:4230338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341900 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTGAGTGCAGGCGGTGGGTGCAGGCGGTGAGTGCAGGCGGTGAGTG
Internal bar code:ATATTTCCAACCTCAGGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2687
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCGCCTGCACTCAC
Suggested primer 2:CTGAGTGCAGGCGGTGAG