Insertion junction: CLIP2.021726_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021726
Chromosome:chromosome 13
Location:775657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566900 (1 of 1) PTHR11289:SF0 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCGGGCAGACGTGCATGAACACACGCATGCAAGAGTTCGCAAGCG
Internal bar code:AAACTTGTGGCAGGATCATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2879
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTTTCATTTGCCAGCG
Suggested primer 2:CTGTTGCTGTTGTTGCTGCT