Insertion junction: CLIP2.021750_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021750
Chromosome:chromosome 12
Location:4585123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAACAAAACAAAGGACGGCGTGGCTCCGGCGGCACCGCCTCAAGAACC
Internal bar code:GATAGTTGTCTATATTTCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGATGGTCATGACGGAGA
Suggested primer 2:GGGTAAGGAATGTGCCACCA