Insertion junction: CLIP2.021750_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021750
Chromosome:chromosome 12
Location:4587037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGACGTCAACCCCTTCCGCGGCGAGGGCTTCAGTCGCGCCGGCGGCAT
Internal bar code:GATAGTTGTCTATATTTCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAAGGAATGTGCCACCA
Suggested primer 2:AGGGATGGTCATGACGGAGA