Insertion junction: CLIP2.021753_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021753
Chromosome:chromosome 6
Location:1603968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261450 High mobility group protein; (1 of 1) K10802 - high mobility group protein B1 (HMGB1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGAGGCCCGCGTCCATGCGGTACTAGCCGTTCAGCTGGGGCGCTTT
Internal bar code:AGAGAGTCGTATAAACCCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4402
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:248
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:248

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGCATACCTTGGCCTT
Suggested primer 2:AGTCTGTGTTCTTCCGCTGG