Insertion junction: CLIP2.021762_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021762
Chromosome:chromosome 10
Location:5240108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456250 TRX16,TRX25,TRL11 (1 of 4) PTHR10438//PTHR10438:SF255 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC; Thioredoxin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCCGATGGTCGCGTGCCCTGGTACAAGAAGCCTTGCGTAAGCTTTG
Internal bar code:GGGTATACGCCTGTCGTAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAGACGCAGCATCGTA
Suggested primer 2:TATCTTCTTGGGCGCCGTTT