Insertion junction: CLIP2.021767_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021767
Chromosome:chromosome 12
Location:2084501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510300 UBC21 E2 Ubiquitin conjugating enzyme; (1 of 1) PF00179//PF10408 - Ubiquitin-conjugating enzyme (UQ_con) // Ubiquitin elongating factor core (Ufd2P_core) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGACAGCACCGTGCCGGGAGGGTACTTCAAGGACGTGAGTGGCGGCT
Internal bar code:CATCTTCCCCGGGTAAAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2047
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTACAGGTTGGGGTTGTA
Suggested primer 2:TGTTTGCAAGTTGAGCGGTG