Insertion junction: CLIP2.021776_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021776
Chromosome:chromosome 16
Location:5350872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683550 (1 of 2) 1.6.2.4 - NADPH--hemoprotein reductase / TPNH-cytochrome c reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCCAAGGGCATGCCTGTGAATAGGCATCGATGATGGTTCCTCCGACC
Internal bar code:TCCGCCATCAGGCCCTACAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:40.7407
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGCCTCGCTAGGATGG
Suggested primer 2:CCATCCTAGCGAGGCTCAAG