Insertion junction: CLIP2.021777_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021777
Chromosome:chromosome 3
Location:6298168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192000 SEC13L,SEH1 COP-II coat subunit, nucleoporin; (1 of 1) K14299 - nucleoporin SEH1 (SEH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCGTGGTTGCGCTTTGCGACTTATCATGTGAGCCGTCTCGATGCCTG
Internal bar code:AGCACACCAGTACATGTGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1875
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTTGGAGAAGGTGGGCT
Suggested primer 2:CGCCCGTTACTCAGTTTCCT