Insertion junction: CLIP2.021778_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021778
Chromosome:chromosome 2
Location:2321893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090600 NUP43 Nucleoporin 43; (1 of 1) PTHR22652:SF0 - NUCLEOPORIN NUP43 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGTTTTTTAAAGTATTAAACAGAAACACCGTGCGTGTGTGGTCGC
Internal bar code:TGAATTCACATACCCCATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACAGACCCTTCCGCTCA
Suggested primer 2:CCTCGTGCTTCACCTTCTGT