Insertion junction: CLIP2.021780_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021780
Chromosome:chromosome 9
Location:3590056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396698 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCCTTACTTTAGGATACACCTTGGAGGCAACGGAATGCGGTACAACA
Internal bar code:GAGCAGCCCCCGCAGTCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACCAATTCGCCGTATC
Suggested primer 2:GGCATCGACAAACAGGAGGA