Insertion junction: CLIP2.021780_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021780
Chromosome:chromosome 9
Location:3590056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396698 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCCTTCATTCGACGCGTTACATGCCAGATTACATGCCGTGGTGTGG
Internal bar code:GAGCAGCCCCCGCAGTCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:7888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCGACAAACAGGAGGA
Suggested primer 2:GCCAACCAATTCGCCGTATC